epi2me2r: Process Nanopore EPI2ME Output for Use in R

The functions in this package take WIMP and ARMA data files generated by Oxford Nanopore EPI2ME workflows, read them, clean them, and prepare them for downstream analysis. This package was written by United States federal government employees in their official capacity. Therefore, it is not protected by copyright and is in the public domain.

Version: 0.1.0
Depends: R (≥ 3.5.0)
Imports: data.table, taxonomizr, phyloseq, Biobase, metagenomeSeq
Suggests: rmarkdown, knitr, reshape2, testthat (≥ 3.0.0)
Published: 2022-06-03
Author: Maggie Weinroth [aut], Quentin D. Read [aut, cre]
Maintainer: Quentin D. Read <quentin.read at usda.gov>
BugReports: https://github.com/mweinroth/epi2me2r/issues
License: CC0
URL: https://mweinroth.github.io/epi2me2r/
NeedsCompilation: no
Citation: epi2me2r citation info
Materials: README NEWS
CRAN checks: epi2me2r results


Reference manual: epi2me2r.pdf
Vignettes: epi2me2r vignette


Package source: epi2me2r_0.1.0.tar.gz
Windows binaries: r-devel: epi2me2r_0.1.0.zip, r-release: epi2me2r_0.1.0.zip, r-oldrel: epi2me2r_0.1.0.zip
macOS binaries: r-release (arm64): epi2me2r_0.1.0.tgz, r-oldrel (arm64): epi2me2r_0.1.0.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available


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