Last updated on 2024-10-07 04:50:00 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 16.21 | 122.48 | 138.69 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.42 | 90.29 | 100.71 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 227.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 236.71 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 14.00 | 159.00 | 173.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 12.86 | 113.53 | 126.39 | ERROR | |
| r-release-linux-x86_64 | 1.1.4 | 13.85 | 114.36 | 128.21 | OK | |
| r-release-macos-arm64 | 1.1.4 | 131.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 252.00 | OK | |||
| r-release-windows-x86_64 | 1.1.4 | 15.00 | 167.00 | 182.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 153.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 237.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 193.00 | 213.00 | OK |
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in ‘refseqR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: refseq_GeneID
> ### Title: Get the GeneID
> ### Aliases: refseq_GeneID
>
> ### ** Examples
>
> # Get the gene symbol from a set of transcript accessions
> transcript = c("XM_004487701", "XM_004488493")
> sapply(transcript, function(x) refseq_GeneID (x, db = "nuccore", retries = 4), USE.NAMES = FALSE)
Error: HTTP failure: 500
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘refseqR.Rmd’ using rmarkdown
Quitting from lines 140-142 [unnamed-chunk-15] (refseqR.Rmd)
Error: processing vignette 'refseqR.Rmd' failed with diagnostics:
HTTP failure: 500
--- failed re-building ‘refseqR.Rmd’
SUMMARY: processing the following file failed:
‘refseqR.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64