Last updated on 2025-07-19 15:51:17 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 249.54 | 262.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.53 | 231.85 | 242.38 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.61 | 277.85 | 291.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 180.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 181.00 | 200.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 169.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 234.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.046, elapsed: 2.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.969, system: 0.109, elapsed: 12.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.215 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.209, elapsed: 5.176 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.108, system: 0.401, elapsed: 20.584 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.518, system: 0.043, elapsed: 2.203 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.043, system: 0.093, elapsed: 13.358 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.011, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.731, system: 0.168, elapsed: 6.550 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.286 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.173, system: 0.337, elapsed: 23.486 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.035, elapsed: 2.768 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.040, system: 0.084, elapsed: 15.018 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.357 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.807, system: 0.191, elapsed: 7.637 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.436 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.129, system: 0.220, elapsed: 1.828 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.501, system: 0.565, elapsed: 29.256 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.449, system: 0.030, elapsed: 3.970 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.028, system: 0.067, elapsed: 19.928 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.013, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.752, system: 0.177, elapsed: 6.616 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.281 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.223, system: 0.442, elapsed: 14.611 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.459, system: 0.762, elapsed: 47.123 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.043, elapsed: 1.584 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.411, system: 0.065, elapsed: 8.743 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.196 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.517, system: 0.177, elapsed: 4.416 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.251, system: 0.319, elapsed: 15.730 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.548, system: 0.038, elapsed: 2.305 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.108, system: 0.111, elapsed: 16.650 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.320 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.667, system: 0.173, elapsed: 5.248 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.206, system: 0.365, elapsed: 25.665 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.497, system: 0.027, elapsed: 1.921 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.943, system: 0.081, elapsed: 20.359 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.513 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.564, system: 0.164, elapsed: 7.596 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.285 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.058, system: 0.221, elapsed: 1.039 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.060, system: 0.547, elapsed: 32.892 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.506, system: 0.031, elapsed: 2.349 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.952, system: 0.059, elapsed: 11.884 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.193 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.396, system: 0.148, elapsed: 4.068 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.195 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.035, system: 0.434, elapsed: 13.747 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.864, system: 0.714, elapsed: 33.314 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64